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Gene: Hmbox1 (homeobox containing 1) Rattus norvegicus
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Symbol: Hmbox1
Name: homeobox containing 1
CRRD ID: 1306787
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; identical protein binding activity; and sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; positive regulation of DNA biosynthetic process; and positive regulation of chromatin binding activity. Predicted to localize to centrosome; cytosol; and nuclear lumen. Orthologous to human HMBOX1 (homeobox containing 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; amphetamine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: homeobox-containing protein 1; LOC305968; RGD1306787; similar to hypothetical protein FLJ21616
Orthologs:
Homo sapiens (human) : HMBOX1 (homeobox containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Hmbox1 (homeobox containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hmbox1 (homeobox containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HMBOX1 (homeobox containing 1)
Canis lupus familiaris (dog) : HMBOX1 (homeobox containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hmbox1 (homeobox containing 1)
Sus scrofa (pig) : HMBOX1 (homeobox containing 1)
Chlorocebus sabaeus (African green monkey) : HMBOX1 (homeobox containing 1)
Heterocephalus glaber (naked mole-rat) : Hmbox1 (homeobox containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01548,194,709 - 48,326,310 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1548,199,995 - 48,284,548 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01551,919,925 - 52,073,979 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41544,182,450 - 44,305,484 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11544,197,983 - 44,320,631 (-)NCBI
Celera1538,744,265 - 38,876,101 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hmbox1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306787
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.