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Gene: Chd1 (chromodomain helicase DNA binding protein 1) Rattus norvegicus
Symbol: Chd1
Name: chromodomain helicase DNA binding protein 1
CRRD ID: 1306794
Description: Predicted to have methylated histone binding activity. Predicted to be involved in chromatin remodeling; covalent chromatin modification; and positive regulation by host of viral transcription. Predicted to localize to cytoplasm and nucleus. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to human CHD1 (chromodomain helicase DNA binding protein 1); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
Also known as: chromodomain-helicase-DNA-binding protein 1; LOC308215
Homo sapiens (human) : CHD1 (chromodomain helicase DNA binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Chd1 (chromodomain helicase DNA binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chd1 (chromodomain helicase DNA binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHD1 (chromodomain helicase DNA binding protein 1)
Canis lupus familiaris (dog) : CHD1 (chromodomain helicase DNA binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chd1 (chromodomain helicase DNA binding protein 1)
Sus scrofa (pig) : CHD1 (chromodomain helicase DNA binding protein 1)
Chlorocebus sabaeus (African green monkey) : CHD1 (chromodomain helicase DNA binding protein 1)
Heterocephalus glaber (naked mole-rat) : Chd1 (chromodomain helicase DNA binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0157,692,828 - 57,756,762 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl157,692,836 - 57,755,485 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0158,619,223 - 58,683,477 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4154,594,860 - 54,631,157 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1154,565,816 - 54,634,109 (+)NCBI
Celera152,866,469 - 52,930,419 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Chd1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306794
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.