Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atp6v0d2 (ATPase H+ transporting V0 subunit D2) Rattus norvegicus
Analyze
Symbol: Atp6v0d2
Name: ATPase H+ transporting V0 subunit D2
Description: Predicted to have proton-exporting ATPase activity, phosphorylative mechanism and proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in vacuolar acidification and vacuolar transport. Localizes to the apical plasma membrane and endosome. Orthologous to human ATP6V0D2 (ATPase H+ transporting V0 subunit d2); PARTICIPATES IN oxidative phosphorylation pathway; phagocytosis pathway; rheumatoid arthritis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2; ATPase, H+ transporting, lysosomal V0 subunit D2; ATPase, H+ transporting, V0 subunit D, isoform 2; LOC297932; MGC109196; V-ATPase subunit d 2; V-type proton ATPase subunit d 2; vacuolar proton pump subunit d 2
Orthologs:
Homo sapiens (human) : ATP6V0D2 (ATPase H+ transporting V0 subunit d2)  HGNC  Alliance
Mus musculus (house mouse) : Atp6v0d2 (ATPase, H+ transporting, lysosomal V0 subunit D2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp6v0d2 (ATPase H+ transporting V0 subunit d2)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP6V0D2 (ATPase H+ transporting V0 subunit d2)
Canis lupus familiaris (dog) : ATP6V0D2 (ATPase H+ transporting V0 subunit d2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp6v0d2 (ATPase H+ transporting V0 subunit d2)
Sus scrofa (pig) : ATP6V0D2 (ATPase H+ transporting V0 subunit d2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0533,843,591 - 33,892,446 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl533,843,519 - 33,892,462 (-)Ensembl
Rnor_5.0538,499,081 - 38,547,691 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4534,476,045 - 34,524,995 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1534,476,226 - 34,525,174 (-)NCBI
Celera532,423,635 - 32,472,662 (-)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atp6v0d2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306900
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.