Gene: Thsd1 (thrombospondin type 1 domain containing 1) Rattus norvegicus
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Symbol: Thsd1
Name: thrombospondin type 1 domain containing 1
Description: Predicted to be involved in hematopoietic progenitor cell differentiation; predicted to localize to the cell periphery, cell surface, and cytosol; orthologous to human THSD1 (thrombospondin type 1 domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC364630; thrombospondin type-1 domain-containing protein 1; thrombospondin, type I, domain 1; thrombospondin, type I, domain containing 1
Orthologs:
Homo sapiens (human) : THSD1 (thrombospondin type 1 domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Thsd1 (thrombospondin, type I, domain 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Thsd1 (thrombospondin type 1 domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : THSD1 (thrombospondin type 1 domain containing 1)
Canis lupus familiaris (dog) : THSD1 (thrombospondin type 1 domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Thsd1 (thrombospondin type 1 domain containing 1)
Sus scrofa (pig) : THSD1 (thrombospondin type 1 domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01674,680,621 - 74,712,368 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01674,316,449 - 74,346,278 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41674,423,526 - 74,453,530 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11674,425,343 - 74,443,897 (-)NCBI
Celera1667,660,826 - 67,690,866 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Thsd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1306998
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.