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Gene: Tmem53 (transmembrane protein 53) Rattus norvegicus
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Symbol: Tmem53
Name: transmembrane protein 53
Description: Predicted to localize to integral component of membrane. Orthologous to human TMEM53 (transmembrane protein 53); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC313529; RGD1307066; similar to RIKEN cDNA 1110038M16
Orthologs:
Homo sapiens (human) : TMEM53 (transmembrane protein 53)  HGNC  Alliance
Mus musculus (house mouse) : Tmem53 (transmembrane protein 53)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem53 (transmembrane protein 53)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM53 (transmembrane protein 53)
Canis lupus familiaris (dog) : TMEM53 (transmembrane protein 53)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem53 (transmembrane protein 53)
Sus scrofa (pig) : TMEM53 (transmembrane protein 53)
Chlorocebus sabaeus (African green monkey) : TMEM53 (transmembrane protein 53)
Heterocephalus glaber (naked mole-rat) : Tmem53 (transmembrane protein 53)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05136,112,417 - 136,127,976 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5136,112,417 - 136,127,976 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,905,905 - 139,921,464 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45137,559,894 - 137,575,740 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15137,565,154 - 137,580,579 (+)NCBI
Celera5129,243,073 - 129,258,614 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem53
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307066
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.