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Gene: Snta1 (syntrophin, alpha 1) Rattus norvegicus
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Symbol: Snta1
Name: syntrophin, alpha 1
Description: Exhibits PDZ domain binding activity. Predicted to contribute to sodium channel regulator activity. Predicted to be involved in several processes, including negative regulation of peptidyl-cysteine S-nitrosylation; regulation of blood circulation; and regulation of ion transmembrane transport. Localizes to neuromuscular junction and sarcolemma. Biomarker of status epilepticus. Human ortholog(s) of this gene implicated in long QT syndrome; long QT syndrome 12; and sudden infant death syndrome. Orthologous to human SNTA1 (syntrophin alpha 1); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; INTERACTS WITH (+)-pilocarpine; 3-chloropropane-1,2-diol; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alpha-1-syntrophin; LOC362242; syntrophin, acidic 1
Orthologs:
Homo sapiens (human) : SNTA1 (syntrophin alpha 1)  HGNC  Alliance
Mus musculus (house mouse) : Snta1 (syntrophin, acidic 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snta1 (syntrophin alpha 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SNTA1 (syntrophin alpha 1)
Canis lupus familiaris (dog) : SNTA1 (syntrophin alpha 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snta1 (syntrophin alpha 1)
Sus scrofa (pig) : SNTA1 (syntrophin alpha 1)
Chlorocebus sabaeus (African green monkey) : SNTA1 (syntrophin alpha 1)
Heterocephalus glaber (naked mole-rat) : Snta1 (syntrophin alpha 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03149,874,023 - 149,905,980 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3149,874,030 - 149,905,944 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03156,245,190 - 156,278,486 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43144,843,678 - 144,874,238 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13144,749,301 - 144,779,860 (-)NCBI
Celera3141,611,616 - 141,641,783 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snta1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307068
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.