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Gene: Cntnap2 (contactin associated protein 2) Rattus norvegicus
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Symbol: Cntnap2
Name: contactin associated protein 2
Description: Exhibits ion channel binding activity and protease binding activity. Predicted to be involved in several processes, including nervous system development; protein localization to juxtaparanode region of axon; and vocal learning. Localizes to several cellular components, including main axon; neuronal cell body; and synaptic membrane. Used to study visual epilepsy. Human ortholog(s) of this gene implicated in several diseases, including Pitt-Hopkins syndrome; autism spectrum disorder (multiple); communication disorder (multiple); cortical dysplasia-focal epilepsy syndrome; and social phobia. Orthologous to human CNTNAP2 (contactin associated protein 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; tetrachloromethane.
Type: protein-coding
RefSeq Status: MODEL
Also known as: contactin associated protein-like 2; contactin-associated protein-like 2; LOC100364190; LOC362355; LOC500105; LOW QUALITY PROTEIN: contactin-associated protein-like 2; mKIAA0868 protein-like; similar to contactin associated protein-like 2 isoform a
Orthologs:
Homo sapiens (human) : CNTNAP2 (contactin associated protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Cntnap2 (contactin associated protein-like 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cntnap2 (contactin associated protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CNTNAP2 (contactin associated protein 2)
Canis lupus familiaris (dog) : CNTNAP2 (contactin associated protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cntnap2 (contactin associated protein 2)
Sus scrofa (pig) : CNTNAP2 (contactin associated protein 2)
Chlorocebus sabaeus (African green monkey) : CNTNAP2 (contactin associated protein 2)
Heterocephalus glaber (naked mole-rat) : Cntnap2 (contactin associated protein 2)
more info ...
Allele / Splice: Cntnap2em1Sage  
Genetic Models: SD-Cntnap2em1Sage
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0474,700,539 - 77,025,463 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04140,006,078 - 140,855,979 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04141,164,125 - 141,697,964 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4474,277,978 - 75,440,178 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1475,661,775 - 75,716,308 (+)NCBI
Celera468,984,397 - 71,173,021 (+)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cntnap2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307076
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.