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Gene: Trmt12 (tRNA methyltransferase 12) Rattus norvegicus
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Symbol: Trmt12
Name: tRNA methyltransferase 12
Description: Predicted to have tRNA methyltransferase activity. Predicted to be involved in tRNA methylation and wybutosine biosynthetic process. Predicted to localize to the cytoplasm. Orthologous to human TRMT12 (tRNA methyltransferase 12 homolog); INTERACTS WITH 1,3-dinitrobenzene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alpha-amino-alpha-carboxypropyl transferase TYW2; LOC314999; RGD1307127; similar to RIKEN cDNA 4632406N01; tRNA methyltranferase 12 homolog (S. cerevisiae); tRNA methyltransferase 12 homolog (S. cerevisiae); tRNA wybutosine-synthesizing protein 2 homolog; tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase; tRNA-yW-synthesizing protein 2
Orthologs:
Homo sapiens (human) : TRMT12 (tRNA methyltransferase 12 homolog)  HGNC  Alliance
Mus musculus (house mouse) : Trmt12 (tRNA methyltranferase 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trmt12 (tRNA methyltransferase 12 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : TRMT12 (tRNA methyltransferase 12 homolog)
Canis lupus familiaris (dog) : TRMT12 (tRNA methyltransferase 12 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trmt12 (tRNA methyltransferase 12 homolog)
Sus scrofa (pig) : TRMT12 (tRNA methyltransferase 12 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0798,748,547 - 98,750,173 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0799,348,971 - 99,350,597 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4795,628,301 - 95,629,927 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1795,662,390 - 95,664,147 (+)NCBI
Celera787,183,178 - 87,184,804 (+)NCBICelera
Cytogenetic Map7q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trmt12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307127
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.