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Gene: Usp16 (ubiquitin specific peptidase 16) Rattus norvegicus
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Symbol: Usp16
Name: ubiquitin specific peptidase 16
Description: Predicted to have several functions, including histone binding activity; peptidase activity; and zinc ion binding activity. Predicted to be involved in several processes, including histone deubiquitination; mitotic cell cycle; and positive regulation of macromolecule biosynthetic process. Predicted to localize to the nucleus. Orthologous to human USP16 (ubiquitin specific peptidase 16); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; INTERACTS WITH (+)-schisandrin B; 2,6-dinitrotoluene; 3-hydroxyisovaleric acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: deubiquitinating enzyme 16; LOC288306; ubiquitin carboxyl-terminal hydrolase 16; ubiquitin specific protease 16; ubiquitin thioesterase 16; ubiquitin thiolesterase 16; ubiquitin-specific-processing protease 16
Orthologs:
Homo sapiens (human) : USP16 (ubiquitin specific peptidase 16)  HGNC  Alliance
Mus musculus (house mouse) : Usp16 (ubiquitin specific peptidase 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp16 (ubiquitin specific peptidase 16)
Pan paniscus (bonobo/pygmy chimpanzee) : USP16 (ubiquitin specific peptidase 16)
Canis lupus familiaris (dog) : USP16 (ubiquitin specific peptidase 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp16 (ubiquitin specific peptidase 16)
Sus scrofa (pig) : USP16 (ubiquitin specific peptidase 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01127,101,213 - 27,130,345 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01130,726,656 - 30,755,793 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41127,204,766 - 27,233,883 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11127,204,765 - 27,233,883 (+)NCBI
Celera1126,433,856 - 26,462,887 (+)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Usp16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307192
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.