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Gene: Pgap4 (post-GPI attachment to proteins GalNAc transferase 4) Rattus norvegicus
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Symbol: Pgap4
Name: post-GPI attachment to proteins GalNAc transferase 4
Description: Predicted to have transferase activity, transferring glycosyl groups. Predicted to be involved in GPI anchor biosynthetic process. Predicted to localize to Golgi membrane. Orthologous to human PGAP4 (post-GPI attachment to proteins GalNAc transferase 4); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362518; MGC109354; post-GPI attachment to proteins factor 4; RGD1307218; similar to RIKEN cDNA 2810432L12; Tmem246; transmembrane protein 246; transmembrane protein C9orf125 homolog
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0564,848,657 - 64,867,925 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl564,848,658 - 64,850,427 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0569,342,418 - 69,357,511 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4566,327,277 - 66,329,047 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1566,332,390 - 66,334,160 (-)NCBI
Celera563,674,478 - 63,676,248 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pgap4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307218
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-30
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.