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Gene: Tnrc6a (trinucleotide repeat containing adaptor 6A) Rattus norvegicus
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Symbol: Tnrc6a
Name: trinucleotide repeat containing adaptor 6A
Description: Predicted to have nucleic acid binding activity. Predicted to be involved in cellular response to starvation; miRNA mediated inhibition of translation; and positive regulation of nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to the RISC complex; cytoplasm; and nucleoplasm. Human ortholog(s) of this gene implicated in epilepsy. Orthologous to human TNRC6A (trinucleotide repeat containing adaptor 6A); PARTICIPATES IN microRNA pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC308971; Tnrc6; trinucleotide repeat containing 6; trinucleotide repeat containing 6a; trinucleotide repeat-containing gene 6A protein
Orthologs:
Homo sapiens (human) : TNRC6A (trinucleotide repeat containing adaptor 6A)  HGNC  Alliance
Mus musculus (house mouse) : Tnrc6a (trinucleotide repeat containing 6a)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnrc6a (trinucleotide repeat containing adaptor 6A)
Pan paniscus (bonobo/pygmy chimpanzee) : TNRC6A (trinucleotide repeat containing adaptor 6A)
Canis lupus familiaris (dog) : TNRC6A (trinucleotide repeat containing adaptor 6A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnrc6a (trinucleotide repeat containing adaptor 6A)
Sus scrofa (pig) : TNRC6A (trinucleotide repeat containing adaptor 6A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01192,991,584 - 193,146,403 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01200,079,394 - 200,206,235 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41181,982,994 - 182,053,510 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11182,122,897 - 182,191,066 (+)NCBI
Celera1175,335,300 - 175,404,345 (+)NCBICelera
Cytogenetic Map1q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tnrc6a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307268
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-06-18
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.