Gene: Atf1 (activating transcription factor 1) Rattus norvegicus
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Symbol: Atf1
Name: activating transcription factor 1
Description: Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific, protein heterodimerization activity, and sequence-specific DNA binding activity; involved in several processes, including cellular protein-containing complex assembly, positive regulation of biosynthetic process, and positive regulation of neuron projection development; localizes to the nucleus and transcription factor complex; biomarker of polycystic kidney disease; orthologous to human ATF1 (activating transcription factor 1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Atf-1; cyclic AMP-dependent transcription factor ATF-1
Orthologs:
Homo sapiens (human) : ATF1 (activating transcription factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Atf1 (activating transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atf1 (activating transcription factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATF1 (activating transcription factor 1)
Canis lupus familiaris (dog) : ATF1 (activating transcription factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atf1 (activating transcription factor 1)
Sus scrofa (pig) : ATF1 (activating transcription factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07141,882,261 - 141,924,790 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07139,692,651 - 139,735,616 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47138,971,063 - 139,014,690 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17139,039,700 - 139,089,879 (+)NCBI
Celera7127,839,929 - 127,882,623 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307360
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.