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Gene: Cdh5 (cadherin 5) Rattus norvegicus
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Symbol: Cdh5
Name: cadherin 5
Description: Predicted to have several functions, including beta-catenin binding activity; enzyme binding activity; and signaling receptor binding activity. Predicted to be involved in several processes, including cell-cell junction organization; regulation of protein modification process; and regulation of protein-containing complex assembly. Predicted to localize to several cellular components, including bicellular tight junction; catenin complex; and nucleus. Orthologous to human CDH5 (cadherin 5); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; vascular endothelial growth factor signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cadherin-5; LOC307618; vascular endothelial cadherin; VE-cadherin
Orthologs:
Homo sapiens (human) : CDH5 (cadherin 5)  HGNC  Alliance
Mus musculus (house mouse) : Cdh5 (cadherin 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdh5 (cadherin 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CDH5 (cadherin 5)
Canis lupus familiaris (dog) : CDH5 (cadherin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdh5 (cadherin 5)
Sus scrofa (pig) : CDH5 (cadherin 5)
Chlorocebus sabaeus (African green monkey) : CDH5 (cadherin 5)
Heterocephalus glaber (naked mole-rat) : Cdh5 (cadherin 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0191,025,122 - 1,074,333 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl191,023,683 - 1,074,365 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0191,022,710 - 1,072,784 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.419779,350 - 816,108 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.119779,507 - 1,129,968 (-)NCBI
Celera19805,477 - 843,688 (-)NCBICelera
Cytogenetic Map19p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cdh5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307370
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.