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Gene: Rprd1a (regulation of nuclear pre-mRNA domain containing 1A) Rattus norvegicus
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Symbol: Rprd1a
Name: regulation of nuclear pre-mRNA domain containing 1A
Description: Predicted to have RNA polymerase II complex binding activity and identical protein binding activity. Predicted to be involved in dephosphorylation of RNA polymerase II C-terminal domain and mRNA 3'-end processing. Predicted to localize to RNA polymerase II, holoenzyme. Orthologous to human RPRD1A (regulation of nuclear pre-mRNA domain containing 1A); INTERACTS WITH bisphenol A; N-ethyl-N-nitrosourea; (2,4,5-trichlorophenoxy)acetic acid (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cyclin-dependent kinase 2B-inhibitor-related protein; LOC291736; P15rs; regulation of nuclear pre-mRNA domain-containing protein 1A; RGD1307374; similar to hypothetical protein MGC36325
Orthologs:
Allele / Splice: Rprd1aTn(sb-T2/Bart3)2.247Mcwi  
Genetic Models: F344-Rprd1aTn(sb-T2/Bart3)2.247Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01816,450,160 - 16,497,913 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1816,453,369 - 16,497,886 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01816,209,135 - 16,256,883 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41816,283,291 - 16,328,357 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11816,309,731 - 16,356,467 (-)NCBI
Celera1815,721,452 - 15,768,465 (-)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rprd1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307374
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.