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Gene: Tarbp2 (TARBP2 subunit of RISC loading complex) Rattus norvegicus
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Symbol: Tarbp2
Name: TARBP2 subunit of RISC loading complex
Description: Predicted to contribute to pre-miRNA binding activity. Predicted to be involved in several processes, including growth; regulation of gene expression; and regulation of viral process. Predicted to localize to several cellular components, including the RISC complex; RISC-loading complex; and nuclear body. Orthologous to human TARBP2 (TARBP2 subunit of RISC loading complex); PARTICIPATES IN microRNA pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17beta-estradiol 3-benzoate; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC363006; MGC124970; RISC-loading complex subunit TARBP2; TAR (HIV) RNA binding protein 2; TAR (HIV-1) RNA binding protein 2; TARBP2, RISC loading complex RNA binding subunit
Orthologs:
Homo sapiens (human) : TARBP2 (TARBP2 subunit of RISC loading complex)  HGNC  Alliance
Mus musculus (house mouse) : Tarbp2 (TARBP2, RISC loading complex RNA binding subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tarbp2 (TARBP2, RISC loading complex RNA binding subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : TARBP2 (TARBP2, RISC loading complex RNA binding subunit)
Canis lupus familiaris (dog) : TARBP2 (TARBP2 subunit of RISC loading complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tarbp2 (TARBP2, RISC loading complex RNA binding subunit)
Sus scrofa (pig) : TARBP2 (TARBP2 subunit of RISC loading complex)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,121,688 - 144,126,860 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07141,912,728 - 141,918,855 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47141,272,043 - 141,273,188 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17141,348,156 - 141,349,625 (+)NCBI
Celera7130,076,808 - 130,081,909 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tarbp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307375
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.