Gene: Irx3 (iroquois homeobox 3) Rattus norvegicus
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Symbol: Irx3
Name: iroquois homeobox 3
Description: Predicted to have sequence-specific DNA binding activity; predicted to be involved in several processes, including animal organ development, energy homeostasis, and regulation of cell development; predicted to localize to the axon, cytoplasm, and nucleus; orthologous to human IRX3 (iroquois homeobox 3); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Iroquois related homeobox 3; Iroquois related homeobox 3 (Drosophila) ; iroquois-class homeodomain protein IRX-3; LOC307721
Orthologs:
Homo sapiens (human) : IRX3 (iroquois homeobox 3)  HGNC  Alliance
Mus musculus (house mouse) : Irx3 (Iroquois related homeobox 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Irx3 (iroquois homeobox 3)
Pan paniscus (bonobo/pygmy chimpanzee) : IRX3 (iroquois homeobox 3)
Canis lupus familiaris (dog) : IRX3 (iroquois homeobox 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Irx3 (iroquois homeobox 3)
Sus scrofa (pig) : IRX3 (iroquois homeobox 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01915,838,714 - 15,842,135 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01926,917,882 - 26,921,326 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41916,345,179 - 16,347,455 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11916,349,206 - 16,352,281 (+)NCBI
Celera1915,124,412 - 15,126,688 (+)NCBICelera
Cytogenetic Map19p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Irx3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307424
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.