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Gene: Ccdc88c (coiled-coil domain containing 88C) Rattus norvegicus
Symbol: Ccdc88c
Name: coiled-coil domain containing 88C
Description: Predicted to have several functions, including G-protein alpha-subunit binding activity; PDZ domain binding activity; and dynein light intermediate chain binding activity. Predicted to be involved in several processes, including apical constriction; intracellular signal transduction; and protein destabilization. Predicted to localize to cell junction; centrosome; and cytoplasm. Human ortholog(s) of this gene implicated in hydrocephalus and spinocerebellar ataxia type 40. Orthologous to human CCDC88C (coiled-coil domain containing 88C); INTERACTS WITH amphetamine; bisphenol A; (-)-demecolcine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC362770; RGD1307429; similar to KIAA1509 protein
Homo sapiens (human) : CCDC88C (coiled-coil domain containing 88C)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc88c (coiled-coil domain containing 88C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc88c (coiled-coil domain containing 88C)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC88C (coiled-coil domain containing 88C)
Canis lupus familiaris (dog) : CCDC88C (coiled-coil domain containing 88C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc88c (coiled-coil domain containing 88C)
Sus scrofa (pig) : CCDC88C (coiled-coil domain containing 88C)
Chlorocebus sabaeus (African green monkey) : CCDC88C (coiled-coil domain containing 88C)
Heterocephalus glaber (naked mole-rat) : Ccdc88c (coiled-coil domain containing 88C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.06124,905,811 - 125,028,011 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6124,905,808 - 125,027,553 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06134,125,645 - 134,247,201 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46125,178,886 - 125,298,359 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16125,182,632 - 125,302,112 (-)NCBI
Celera6117,696,139 - 117,817,662 (-)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Ccdc88c
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307429
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.