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Gene: Set (SET nuclear proto-oncogene) Rattus norvegicus
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Symbol: Set
Name: SET nuclear proto-oncogene
Description: Predicted to have DNA binding activity. Predicted to be involved in negative regulation of neuron apoptotic process and negative regulation of transcription, DNA-templated. Predicted to localize to several cellular components, including the cytoplasm; lipid droplet; and nucleoplasm. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability. Orthologous to human SET (SET nuclear proto-oncogene); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ab1-115; I-2PP2A; liver regeneration-related protein LRRGR00002; LOC307947; phosphatase 2A inhibitor I2PP2A; SET nuclear oncogene; SET translocation; TAF-I; template-activating factor I
Orthologs:
Homo sapiens (human) : SET (SET nuclear proto-oncogene)  HGNC  Alliance
Mus musculus (house mouse) : Set (SET nuclear oncogene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Set (SET nuclear proto-oncogene)
Pan paniscus (bonobo/pygmy chimpanzee) : SET (SET nuclear proto-oncogene)
Canis lupus familiaris (dog) : SET (SET nuclear proto-oncogene)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Set (SET nuclear proto-oncogene)
Sus scrofa (pig) : SET (SET nuclear proto-oncogene)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01958,420,635 - 58,422,153 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01969,119,722 - 69,121,240 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41955,797,060 - 55,798,578 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11955,801,940 - 55,803,459 (+)NCBI
Celera1952,922,285 - 52,923,803 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Set
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307467
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.