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Gene: Plxdc1 (plexin domain containing 1) Rattus norvegicus
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Symbol: Plxdc1
Name: plexin domain containing 1
CRRD ID: 1307496
Description: Involved in spinal cord development. Localizes to dendrite and neuronal cell body. Orthologous to human PLXDC1 (plexin domain containing 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ADP-ribosylation factor-like 12; Arl12; LOC303505; plexin domain-containing protein 1; Tem7; tumor endothelial marker7
Orthologs:
Homo sapiens (human) : PLXDC1 (plexin domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Plxdc1 (plexin domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Plxdc1 (plexin domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PLXDC1 (plexin domain containing 1)
Canis lupus familiaris (dog) : PLXDC1 (plexin domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Plxdc1 (plexin domain containing 1)
Sus scrofa (pig) : PLXDC1 (plexin domain containing 1)
Chlorocebus sabaeus (African green monkey) : PLXDC1 (plexin domain containing 1)
Heterocephalus glaber (naked mole-rat) : Plxdc1 (plexin domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01085,871,122 - 85,938,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1085,871,122 - 85,938,085 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01085,657,448 - 85,726,578 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41086,688,500 - 86,748,229 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11086,704,112 - 86,762,473 (-)NCBI
Celera1081,675,768 - 81,735,367 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Plxdc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307496
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.