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Gene: Knl1 (kinetochore scaffold 1) Rattus norvegicus
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Symbol: Knl1
Name: kinetochore scaffold 1
CRRD ID: 1307498
Description: Predicted to be involved in attachment of spindle microtubules to kinetochore and protein localization to kinetochore. Predicted to localize to condensed chromosome kinetochore and nucleus. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly and primary autosomal recessive microcephaly 4. Orthologous to human KNL1 (kinetochore scaffold 1); INTERACTS WITH 1,1-dichloroethene (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cancer susceptibility candidate 5; Casc5; LOC102549359; LOC311327; Rad51; RAD51 homolog; uncharacterized LOC102549359
Orthologs:
Mus musculus (house mouse) : Knl1 (kinetochore scaffold 1)  MGI  Alliance
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03110,847,304 - 110,909,807 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3110,855,000 - 110,909,807 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03117,385,194 - 117,453,522 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43105,561,365 - 105,615,047NCBIRGSC3.4rn4RGSC3.4
Celera3104,950,722 - 105,005,517 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Knl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307498
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.