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Gene: Rapgef6 (Rap guanine nucleotide exchange factor 6) Rattus norvegicus
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Symbol: Rapgef6
Name: Rap guanine nucleotide exchange factor 6
Description: Predicted to have GTP-dependent protein binding activity; enzyme binding activity; and phosphatidic acid binding activity. Predicted to be involved in microvillus assembly; positive regulation of GTPase activity; and protein localization to plasma membrane. Predicted to localize to the apical plasma membrane; centrosome; and cytoplasm. Orthologous to human RAPGEF6 (Rap guanine nucleotide exchange factor 6); INTERACTS WITH (RS)-amphetamine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC303141; Rap guanine nucleotide exchange factor (GEF) 6
Orthologs:
Homo sapiens (human) : RAPGEF6 (Rap guanine nucleotide exchange factor 6)  HGNC  Alliance
Mus musculus (house mouse) : Rapgef6 (Rap guanine nucleotide exchange factor (GEF) 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rapgef6 (Rap guanine nucleotide exchange factor 6)
Pan paniscus (bonobo/pygmy chimpanzee) : RAPGEF6 (Rap guanine nucleotide exchange factor 6)
Canis lupus familiaris (dog) : RAPGEF6 (Rap guanine nucleotide exchange factor 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rapgef6 (Rap guanine nucleotide exchange factor 6)
Sus scrofa (pig) : RAPGEF6 (Rap guanine nucleotide exchange factor 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01039,875,322 - 40,039,929 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01039,648,090 - 39,812,677 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41039,935,952 - 40,101,623 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11039,949,735 - 40,131,150 (+)NCBI
Celera1037,996,384 - 38,160,561 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rapgef6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307645
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.