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Gene: Cavin1 (caveolae associated protein 1) Rattus norvegicus
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Symbol: Cavin1
Name: caveolae associated protein 1
Description: Predicted to have identical protein binding activity and rRNA primary transcript binding activity. Predicted to be involved in positive regulation of cell motility; protein secretion; and transcription, DNA-templated. Localizes to the caveola. Human ortholog(s) of this gene implicated in congenital generalized lipodystrophy type 4. Orthologous to human CAVIN1 (caveolae associated protein 1); PARTICIPATES IN RNA polymerase I transcription pathway; INTERACTS WITH 4-amino-2,6-dinitrotoluene; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cav-p60; caveolae-associated protein 1; cavin; cavin-1; LOC287710; polymerase I and transcript release factor; Ptrf
Orthologs:
Homo sapiens (human) : CAVIN1 (caveolae associated protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Cavin1 (caveolae associated 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cavin1 (caveolae associated protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CAVIN1 (caveolae associated protein 1)
Canis lupus familiaris (dog) : CAVIN1 (caveolae associated protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cavin1 (caveolae associated protein 1)
Sus scrofa (pig) : CAVIN1 (caveolae associated protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01088,862,513 - 88,874,495 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1088,860,733 - 88,874,528 (-)Ensembl
Rnor_5.01088,659,595 - 88,671,569 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,893,481 - 89,905,343 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11089,907,956 - 89,920,032 (-)NCBI
Celera1084,601,760 - 84,613,734 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cavin1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307685
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.