Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tbx1 (T-box transcription factor 1) Rattus norvegicus
Analyze
Symbol: Tbx1
Name: T-box transcription factor 1
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II activating transcription factor binding activity; and RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including animal organ development; positive regulation of cell population proliferation; and vasculature development. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in DiGeorge syndrome; tetralogy of Fallot; and velocardiofacial syndrome. Orthologous to human TBX1 (T-box transcription factor 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360737; T-box 1; T-box transcription factor TBX1
Orthologs:
Homo sapiens (human) : TBX1 (T-box transcription factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Tbx1 (T-box 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tbx1 (T-box transcription factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TBX1 (T-box transcription factor 1)
Canis lupus familiaris (dog) : TBX1 (T-box transcription factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tbx1 (T-box transcription factor 1)
Sus scrofa (pig) : TBX1 (T-box transcription factor 1)
Chlorocebus sabaeus (African green monkey) : TBX1 (T-box transcription factor 1)
Heterocephalus glaber (naked mole-rat) : Tbx1 (T-box transcription factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01186,552,022 - 86,561,647 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1186,552,022 - 86,560,969 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01189,651,955 - 89,661,553 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41184,400,980 - 84,410,631 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11184,445,104 - 84,451,228 (+)NCBI
Celera1181,184,983 - 81,193,848 (+)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tbx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307734
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.