Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Actl6a (actin-like 6A) Rattus norvegicus
Analyze
Symbol: Actl6a
Name: actin-like 6A
Description: Predicted to have chromatin binding activity. Involved in spinal cord development. Predicted to localize to the nuclear lumen and plasma membrane. Orthologous to human ACTL6A (actin like 6A); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; INO80 family mediated chromatin remodeling pathway; pancreatic cancer pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bis(2-ethylhexyl) phthalate; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: actin-like protein 6A; LOC361925; MGC112664; RGD1307747; similar to BAF53a
Orthologs:
Homo sapiens (human) : ACTL6A (actin like 6A)  HGNC  Alliance
Mus musculus (house mouse) : Actl6a (actin-like 6A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Actl6a (actin like 6A)
Pan paniscus (bonobo/pygmy chimpanzee) : ACTL6A (actin like 6A)
Canis lupus familiaris (dog) : ACTL6A (actin like 6A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Actl6a (actin like 6A)
Sus scrofa (pig) : ACTL6A (actin like 6A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02119,112,776 - 119,128,870 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02138,764,113 - 138,780,207 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42118,919,542 - 118,935,591 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12118,864,447 - 118,880,186 (+)NCBI
Celera2110,595,992 - 110,611,991 (+)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Actl6a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307747
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.