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Gene: Hmgn1 (high mobility group nucleosome binding domain 1) Rattus norvegicus
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Symbol: Hmgn1
Name: high mobility group nucleosome binding domain 1
CRRD ID: 1307761
Description: Predicted to have chromatin binding activity. Predicted to be involved in several processes, including nucleotide-excision repair; positive regulation of NAD+ ADP-ribosyltransferase activity; and response to UV. Predicted to localize to nucleoplasm. Orthologous to human HMGN1 (high mobility group nucleosome binding domain 1); PARTICIPATES IN nucleotide excision repair pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: high mobility group nucleosomal binding domain 1; high-mobility group nucleosome binding domain 1; LOC360704; non-histone chromosomal protein HMG-14
Orthologs:
Homo sapiens (human) : HMGN1 (high mobility group nucleosome binding domain 1)  HGNC  Alliance
Mus musculus (house mouse) : Hmgn1 (high mobility group nucleosomal binding domain 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hmgn1 (high mobility group nucleosome binding domain 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HMGN1 (high mobility group nucleosome binding domain 1)
Canis lupus familiaris (dog) : HMGN1 (high mobility group nucleosome binding domain 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hmgn1 (high mobility group nucleosome binding domain 1)
Sus scrofa (pig) : HMGN1 (high mobility group nucleosome binding domain 1)
Chlorocebus sabaeus (African green monkey) : HMGN1 (high mobility group nucleosome binding domain 1)
Heterocephalus glaber (naked mole-rat) : Hmgn1 (high mobility group nucleosome binding domain 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01136,474,028 - 36,479,947 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1136,474,840 - 36,479,868 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01140,004,657 - 40,010,576 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,429,800 - 36,435,719 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11136,487,388 - 36,493,308 (-)NCBI
Celera1133,043,906 - 33,049,825 (+)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hmgn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307761
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.