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Gene: Actl6b (actin-like 6B) Rattus norvegicus
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Symbol: Actl6b
Name: actin-like 6B
Description: Predicted to have chromatin binding activity. Involved in spinal cord development. Localizes to the nucleus. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy. Orthologous to human ACTL6B (actin like 6B); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; INTERACTS WITH bisphenol A; Soman; 3,4-methylenedioxymethamphetamine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: actin-like 6; actin-like protein 6B; Actl6; BAF53B; BRG1-associated factor 53B; LOC288563
Orthologs:
Homo sapiens (human) : ACTL6B (actin like 6B)  HGNC  Alliance
Mus musculus (house mouse) : Actl6b (actin-like 6B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Actl6b (actin like 6B)
Pan paniscus (bonobo/pygmy chimpanzee) : ACTL6B (actin like 6B)
Canis lupus familiaris (dog) : ACTL6B (actin like 6B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Actl6b (actin like 6B)
Sus scrofa (pig) : ACTL6B (actin like 6B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01222,194,595 - 22,211,107 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01224,211,502 - 24,227,916 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41219,621,722 - 19,638,202 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11219,611,286 - 19,627,763 (+)NCBI
Celera1220,930,049 - 20,946,506 (-)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Actl6b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307763
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.