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Gene: Ttc8 (tetratricopeptide repeat domain 8) Rattus norvegicus
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Symbol: Ttc8
Name: tetratricopeptide repeat domain 8
Description: Predicted to have RNA polymerase II repressing transcription factor binding activity. Predicted to be involved in several processes, including morphogenesis of a polarized epithelium; nervous system development; and non-motile cilium assembly. Predicted to localize to several cellular components, including BBSome; microtubule organizing center; and photoreceptor connecting cilium. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome; Bardet-Biedl syndrome 8; and retinitis pigmentosa 51. Orthologous to human TTC8 (tetratricopeptide repeat domain 8); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cobalt dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC299246; tetratricopeptide repeat protein 8
Orthologs:
Homo sapiens (human) : TTC8 (tetratricopeptide repeat domain 8)  HGNC  Alliance
Mus musculus (house mouse) : Ttc8 (tetratricopeptide repeat domain 8)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ttc8 (tetratricopeptide repeat domain 8)
Pan paniscus (bonobo/pygmy chimpanzee) : TTC8 (tetratricopeptide repeat domain 8)
Canis lupus familiaris (dog) : TTC8 (tetratricopeptide repeat domain 8)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ttc8 (tetratricopeptide repeat domain 8)
Sus scrofa (pig) : TTC8 (tetratricopeptide repeat domain 8)
Chlorocebus sabaeus (African green monkey) : TTC8 (tetratricopeptide repeat domain 8)
Heterocephalus glaber (naked mole-rat) : Ttc8 (tetratricopeptide repeat domain 8)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06122,920,308 - 122,974,525 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6122,920,317 - 122,974,522 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06132,140,808 - 132,207,306 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46123,117,534 - 123,171,840 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16123,121,373 - 123,174,881 (+)NCBI
Celera6115,755,975 - 115,810,232 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ttc8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307769
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.