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Gene: Patl2 (PAT1 homolog 2) Rattus norvegicus
Symbol: Patl2
Name: PAT1 homolog 2
Description: Predicted to have RNA binding activity. Predicted to be involved in cytoplasmic mRNA processing body assembly; deadenylation-dependent decapping of nuclear-transcribed mRNA; and negative regulation of cytoplasmic mRNA processing body assembly. Predicted to localize to P-body and nucleus. Orthologous to human PATL2 (PAT1 homolog 2); INTERACTS WITH (+)-catechin (ortholog); aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: gene
RefSeq Status: MODEL
Also known as: LOC366176; protein associated with topoisomerase II homolog 2 (yeast); RGD1307887; similar to RIKEN cDNA 4930424G05
Homo sapiens (human) : PATL2 (PAT1 homolog 2)  HGNC  Alliance
Mus musculus (house mouse) : Patl2 (protein associated with topoisomerase II homolog 2 (yeast))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Patl2 (PAT1 homolog 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PATL2 (PAT1 homolog 2)
Canis lupus familiaris (dog) : PATL2 (PAT1 homolog 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Patl2 (PAT1 homolog 2)
Chlorocebus sabaeus (African green monkey) : PATL2 (PAT1 homolog 2)
Heterocephalus glaber (naked mole-rat) : Patl2 (PAT1 homolog 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.03114,065,814 - 114,075,404 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,066,840 - 114,074,803 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03120,606,026 - 120,615,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43108,906,763 - 108,915,422 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13108,813,002 - 108,825,167 (-)NCBI
Celera3107,972,519 - 107,982,105 (-)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Patl2
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307887
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.