Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Clptm1l (CLPTM1-like) Rattus norvegicus
Analyze
Symbol: Clptm1l
Name: CLPTM1-like
Description: Predicted to localize to the integral component of membrane. Orthologous to human CLPTM1L (CLPTM1 like); INTERACTS WITH 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole; 6-propyl-2-thiouracil; amiodarone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cleft lip and palate transmembrane protein 1-like protein; LOC316916; RGD1307896; similar to cisplatin resistance related protein CRR9p
Orthologs:
Homo sapiens (human) : CLPTM1L (CLPTM1 like)  HGNC  Alliance
Mus musculus (house mouse) : Clptm1l (CLPTM1-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clptm1l (CLPTM1 like)
Pan paniscus (bonobo/pygmy chimpanzee) : CLPTM1L (CLPTM1 like)
Canis lupus familiaris (dog) : CLPTM1L (CLPTM1 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clptm1l (CLPTM1 like)
Sus scrofa (pig) : CLPTM1L (CLPTM1 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0132,281,207 - 32,297,196 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0133,706,075 - 33,722,058 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4130,474,672 - 30,490,655 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1130,477,611 - 30,493,598 (-)NCBI
Celera128,315,536 - 28,331,519 (-)NCBICelera
Cytogenetic Map1p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clptm1l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307896
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.