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Gene: Tmem38a (transmembrane protein 38a) Rattus norvegicus
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Symbol: Tmem38a
Name: transmembrane protein 38a
Description: Predicted to have potassium channel activity. Predicted to be involved in several processes, including cellular response to caffeine; inorganic cation transmembrane transport; and protein homotrimerization. Predicted to localize to the nuclear membrane and sarcoplasmic reticulum. Orthologous to human TMEM38A (transmembrane protein 38A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 27 kDa sarcoplasmic reticulum protein; LOC306327; RGD1307901; similar to RIKEN cDNA 1110001E17; SPR-27; Srp-27; TRIC-A; TRICA; trimeric intracellular cation channel type A
Orthologs:
Homo sapiens (human) : TMEM38A (transmembrane protein 38A)  HGNC  Alliance
Mus musculus (house mouse) : Tmem38a (transmembrane protein 38A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem38a (transmembrane protein 38A)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM38A (transmembrane protein 38A)
Canis lupus familiaris (dog) : TMEM38A (transmembrane protein 38A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem38a (transmembrane protein 38A)
Sus scrofa (pig) : TMEM38A (transmembrane protein 38A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01618,960,197 - 18,974,942 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01618,822,741 - 18,837,486 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41617,669,835 - 17,684,440 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11617,668,985 - 17,684,446 (-)NCBI
Celera1617,478,830 - 17,493,434 (-)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem38a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307901
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.