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Gene: Banf2 (BANF family member 2) Rattus norvegicus
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Symbol: Banf2
Name: BANF family member 2
CRRD ID: 1307909
Description: Predicted to have DNA binding activity and identical protein binding activity. Predicted to be involved in chromosome condensation and chromosome segregation. Predicted to localize to nucleoplasm. Orthologous to human BANF2 (BANF family member 2); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: MODEL
Also known as: barrier to autointegration factor 2; LOC296198; RGD1307909; similar to Hypothetical BAF-like protein C20orf179
Orthologs:
Homo sapiens (human) : BANF2 (BANF family member 2)  HGNC  Alliance
Mus musculus (house mouse) : Banf2 (BANF family member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Banf2 (BANF family member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : BANF2 (BANF family member 2)
Canis lupus familiaris (dog) : BANF2 (BANF family member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Banf2 (BANF family member 2)
Sus scrofa (pig) : BANF2 (BANF family member 2)
Chlorocebus sabaeus (African green monkey) : BANF2 (BANF family member 2)
Heterocephalus glaber (naked mole-rat) : Banf2 (BANF family member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03138,128,123 - 138,183,750 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3138,174,054 - 138,183,696 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03144,566,387 - 144,622,101 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43132,584,846 - 132,598,440 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13132,490,409 - 132,504,011 (+)NCBI
Celera3130,285,865 - 130,331,321 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Banf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1307909
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.