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Gene: Sim2 (SIM bHLH transcription factor 2) Rattus norvegicus
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Symbol: Sim2
Name: SIM bHLH transcription factor 2
Description: Predicted to have DNA binding activity; DNA-binding transcription factor activity, RNA polymerase II-specific; and protein heterodimerization activity. Predicted to be involved in embryonic pattern specification; lung development; and negative regulation of transcription by RNA polymerase II. Predicted to localize to the nuclear body. Orthologous to human SIM2 (SIM bHLH transcription factor 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; acrylamide; aldehydo-D-glucose.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC304071; single-minded 2; single-minded family bHLH transcription factor 2; single-minded homolog 2; single-minded homolog 2 (Drosophila)
Orthologs:
Homo sapiens (human) : SIM2 (SIM bHLH transcription factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Sim2 (single-minded family bHLH transcription factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sim2 (SIM bHLH transcription factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SIM2 (SIM bHLH transcription factor 2)
Canis lupus familiaris (dog) : SIM2 (SIM bHLH transcription factor 2)
Sus scrofa (pig) : SIM2 (SIM bHLH transcription factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01134,315,739 - 34,355,183 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01137,902,943 - 37,942,470 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41134,335,645 - 34,376,925 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11134,392,956 - 34,432,046 (+)NCBI
Celera1134,996,179 - 35,035,627 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sim2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308016
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.