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Gene: Rnf213 (ring finger protein 213) Rattus norvegicus
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Symbol: Rnf213
Name: ring finger protein 213
Description: Predicted to have ATPase activity and ubiquitin-protein transferase activity. Predicted to be involved in several processes, including cellular protein metabolic process; protein homooligomerization; and sprouting angiogenesis. Predicted to localize to the cytosol and nucleolus. Human ortholog(s) of this gene implicated in Moyamoya disease. Orthologous to human RNF213 (ring finger protein 213); INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3,3',5,5'-tetrabromobisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: E3 ubiquitin-protein ligase RNF213; LOC303735; protein ALO17; RGD1308168; similar to chromosome 17 open reading frame 27
Orthologs:
Homo sapiens (human) : RNF213 (ring finger protein 213)  HGNC  Alliance
Mus musculus (house mouse) : Rnf213 (ring finger protein 213)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf213 (ring finger protein 213)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF213 (ring finger protein 213)
Canis lupus familiaris (dog) : RNF213 (ring finger protein 213)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf213 (ring finger protein 213)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010108,527,351 - 108,626,372 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010108,134,305 - 108,230,724 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410108,765,490 - 108,862,935 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110108,778,807 - 108,875,755 (+)NCBI
Celera10103,204,438 - 103,300,991 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rnf213
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308168
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.