Gene: Pbx1 (PBX homeobox 1) Rattus norvegicus
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Symbol: Pbx1
Name: PBX homeobox 1
Description: Predicted to contribute to RNA polymerase II regulatory region sequence-specific DNA binding activity; predicted to be involved in several processes, including animal organ development, regionalization, and regulation of cellular biosynthetic process; predicted to localize to the RNA polymerase II transcription factor complex, cytoplasm, and nucleoplasm; orthologous to human PBX1 (PBX homeobox 1); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC304947; pre-B-cell leukemia homeobox 1; pre-B-cell leukemia transcription factor 1
Orthologs:
Homo sapiens (human) : PBX1 (PBX homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Pbx1 (pre B cell leukemia homeobox 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pbx1 (PBX homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PBX1 (PBX homeobox 1)
Canis lupus familiaris (dog) : PBX1 (PBX homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pbx1 (PBX homeobox 1)
Sus scrofa (pig) : PBX1 (PBX homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01386,390,741 - 86,671,460 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01391,028,026 - 91,307,274 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41383,839,256 - 84,115,516 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11383,853,894 - 84,129,704 (-)NCBI
Celera1380,014,082 - 80,284,838 (-)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pbx1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308213
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.