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Gene: Pbx1 (PBX homeobox 1) Rattus norvegicus
Symbol: Pbx1
Name: PBX homeobox 1
Description: Predicted to contribute to RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including animal organ development; regionalization; and regulation of transcription, DNA-templated. Predicted to localize to RNA polymerase II transcription factor complex; cytoplasm; and nucleoplasm. Human ortholog(s) of this gene implicated in B-lymphoblastic leukemia/lymphoma. Orthologous to human PBX1 (PBX homeobox 1); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC304947; pre-B-cell leukemia homeobox 1; pre-B-cell leukemia transcription factor 1
Homo sapiens (human) : PBX1 (PBX homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Pbx1 (pre B cell leukemia homeobox 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pbx1 (PBX homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PBX1 (PBX homeobox 1)
Canis lupus familiaris (dog) : PBX1 (PBX homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pbx1 (PBX homeobox 1)
Sus scrofa (pig) : PBX1 (PBX homeobox 1)
Chlorocebus sabaeus (African green monkey) : PBX1 (PBX homeobox 1)
Heterocephalus glaber (naked mole-rat) : Pbx1 (PBX homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01386,390,741 - 86,671,460 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1386,390,741 - 86,451,002 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01391,028,026 - 91,307,274 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41383,839,256 - 84,115,516 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11383,853,894 - 84,129,704 (-)NCBI
Celera1380,014,082 - 80,284,838 (-)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Pbx1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308213
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.