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Gene: Chst12 (carbohydrate sulfotransferase 12) Rattus norvegicus
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Symbol: Chst12
Name: carbohydrate sulfotransferase 12
Description: Predicted to have chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process and dermatan sulfate biosynthetic process. Predicted to localize to Golgi membrane and integral component of membrane. Orthologous to human CHST12 (carbohydrate sulfotransferase 12); PARTICIPATES IN chondroitin sulfate biosynthetic pathway; sulfur metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carbohydrate (chondroitin 4) sulfotransferase 12; LOC304322; MGC112823
Orthologs:
Homo sapiens (human) : CHST12 (carbohydrate sulfotransferase 12)  HGNC  Alliance
Mus musculus (house mouse) : Chst12 (carbohydrate sulfotransferase 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chst12 (carbohydrate sulfotransferase 12)
Pan paniscus (bonobo/pygmy chimpanzee) : CHST12 (carbohydrate sulfotransferase 12)
Canis lupus familiaris (dog) : CHST12 (carbohydrate sulfotransferase 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chst12 (carbohydrate sulfotransferase 12)
Sus scrofa (pig) : CHST12 (carbohydrate sulfotransferase 12)
Chlorocebus sabaeus (African green monkey) : CHST12 (carbohydrate sulfotransferase 12)
Heterocephalus glaber (naked mole-rat) : Chst12 (carbohydrate sulfotransferase 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01216,199,975 - 16,218,404 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1216,200,019 - 16,201,632 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01218,193,299 - 18,211,432 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,577,440 - 14,579,051 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11214,607,640 - 14,608,900 (-)NCBI
Celera1215,869,923 - 15,871,534 (-)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Chst12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308214
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.