Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Vps29 (VPS29 retromer complex component) Rattus norvegicus
Analyze
Symbol: Vps29
Name: VPS29 retromer complex component
Description: Predicted to have metal ion binding activity. Predicted to be involved in endosomal transport and intracellular protein transport. Predicted to localize to the cytoplasm; intracellular membrane-bounded organelle; and retromer, cargo-selective complex. Orthologous to human VPS29 (VPS29 retromer complex component); PARTICIPATES IN retromer-mediated pathway; INTERACTS WITH (RS)-amphetamine; 1,3,5-trinitro-1,3,5-triazinane; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC288666; vacuolar protein sorting 29; vacuolar protein sorting 29 (S. pombe) ; vacuolar protein sorting 29 homolog; vacuolar protein sorting 29 homolog (S. cerevisiae); Vacuolar protein sorting-associated protein 29; Vesicle protein sorting 29
Orthologs:
Homo sapiens (human) : VPS29 (VPS29 retromer complex component)  HGNC  Alliance
Mus musculus (house mouse) : Vps29 (VPS29 retromer complex component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps29 (VPS29 retromer complex component)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS29 (VPS29 retromer complex component)
Canis lupus familiaris (dog) : VPS29 (VPS29 retromer complex component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps29 (VPS29 retromer complex component)
Sus scrofa (pig) : VPS29 (VPS29 retromer complex component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01239,690,069 - 39,699,114 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01241,570,698 - 41,579,742 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,403,351 - 35,412,395 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11235,266,872 - 35,275,774 (-)NCBI
Celera1235,879,772 - 35,888,815 (-)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vps29
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308332
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.