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Gene: Patz1 (POZ (BTB) and AT hook containing zinc finger 1) Rattus norvegicus
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Symbol: Patz1
Name: POZ (BTB) and AT hook containing zinc finger 1
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II proximal promoter sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including animal organ development; negative regulation of endothelial cell migration; and spermatogenesis. Predicted to localize to the nucleoplasm. Orthologous to human PATZ1 (POZ/BTB and AT hook containing zinc finger 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC305471; POZ-, AT hook-, and zinc finger-containing protein 1; Zfp278; zinc finger protein 278; Znf278
Orthologs:
Homo sapiens (human) : PATZ1 (POZ/BTB and AT hook containing zinc finger 1)  HGNC  Alliance
Mus musculus (house mouse) : Patz1 (POZ (BTB) and AT hook containing zinc finger 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Patz1 (POZ/BTB and AT hook containing zinc finger 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PATZ1 (POZ/BTB and AT hook containing zinc finger 1)
Canis lupus familiaris (dog) : PATZ1 (POZ/BTB and AT hook containing zinc finger 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Patz1 (POZ/BTB and AT hook containing zinc finger 1)
Sus scrofa (pig) : PATZ1 (POZ/BTB and AT hook containing zinc finger 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01483,509,763 - 83,528,898 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01484,198,755 - 84,217,034 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41483,905,714 - 83,936,768 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11483,915,647 - 83,934,526 (+)NCBI
Celera1477,068,978 - 77,087,236 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Patz1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308337
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.