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Gene: Cdh9 (cadherin 9) Rattus norvegicus
Symbol: Cdh9
Name: cadherin 9
Description: Predicted to have several functions, including cadherin binding activity involved in cell-cell adhesion; calcium ion binding activity; and identical protein binding activity. Involved in synapse assembly and synaptic membrane adhesion. Localizes to integral component of postsynaptic membrane and integral component of presynaptic membrane. Orthologous to human CDH9 (cadherin 9); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; tributylstannane.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: cadherin 9, type 2, T1-cadherin; cadherin-9
Homo sapiens (human) : CDH9 (cadherin 9)  HGNC  Alliance
Mus musculus (house mouse) : Cdh9 (cadherin 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdh9 (cadherin 9)
Pan paniscus (bonobo/pygmy chimpanzee) : CDH9 (cadherin 9)
Canis lupus familiaris (dog) : CDH9 (cadherin 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdh9 (cadherin 9)
Sus scrofa (pig) : CDH9 (cadherin 9)
Chlorocebus sabaeus (African green monkey) : CDH9 (cadherin 9)
Heterocephalus glaber (naked mole-rat) : Cdh9 (cadherin 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0266,938,796 - 67,078,897 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl266,940,057 - 67,078,784 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0286,671,543 - 86,810,559 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4266,843,486 - 66,932,153 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1266,771,683 - 66,860,318 (+)NCBI
Celera262,177,486 - 62,264,139 (+)NCBICelera
Cytogenetic Map2q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Cdh9
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308343
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.