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Gene: Tfap4 (transcription factor AP-4) Rattus norvegicus
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Symbol: Tfap4
Name: transcription factor AP-4
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; E-box binding activity; and histone deacetylase binding activity. Predicted to be involved in several processes, including negative regulation of cell cycle; regulation of transcription, DNA-templated; and regulation of viral transcription. Predicted to localize to the mitochondrion; nucleus; and transcriptional repressor complex. Orthologous to human TFAP4 (transcription factor AP-4); INTERACTS WITH (RS)-amphetamine; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360482; Tcfap4; transcription factor AP-4 (activating enhancer binding protein 4); transcription factor AP4
Orthologs:
Homo sapiens (human) : TFAP4 (transcription factor AP-4)  HGNC  Alliance
Mus musculus (house mouse) : Tfap4 (transcription factor AP4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tfap4 (transcription factor AP-4)
Pan paniscus (bonobo/pygmy chimpanzee) : TFAP4 (transcription factor AP-4)
Canis lupus familiaris (dog) : TFAP4 (transcription factor AP-4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tfap4 (transcription factor AP-4)
Sus scrofa (pig) : TFAP4 (transcription factor AP-4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01011,204,616 - 11,222,975 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0109,968,255 - 9,986,048 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41011,144,057 - 11,159,763 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11011,144,056 - 11,159,763 (+)NCBI
Celera109,964,931 - 9,979,711 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tfap4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308357
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.