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Gene: Scp2d1 (SCP2 sterol-binding domain containing 1) Rattus norvegicus
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Symbol: Scp2d1
Name: SCP2 sterol-binding domain containing 1
Description: Predicted to be involved in phospholipid transport; positive regulation of intracellular cholesterol transport; and steroid biosynthetic process. Orthologous to human SCP2D1 (SCP2 sterol binding domain containing 1); INTERACTS WITH bisphenol A; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC311491; LOC311491; RGD1308385; SCP2 sterol-binding domain-containing protein 1; similar to RIKEN cDNA 1700010M22; uncharacterized protein LOC311491
Orthologs:
Homo sapiens (human) : SCP2D1 (SCP2 sterol binding domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Scp2d1 (SCP2 sterol-binding domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scp2d1 (SCP2 sterol binding domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCP2D1 (SCP2 sterol binding domain containing 1)
Canis lupus familiaris (dog) : SCP2D1 (SCP2 sterol binding domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scp2d1 (SCP2 sterol binding domain containing 1)
Sus scrofa (pig) : SCP2D1 (SCP2 sterol binding domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03138,973,171 - 138,975,624 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3138,974,871 - 138,975,621 (+)Ensembl
Rnor_5.03145,405,170 - 145,405,920 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43133,374,144 - 133,374,894 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13133,279,707 - 133,280,377 (+)NCBI
Celera3131,086,358 - 131,087,108 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scp2d1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308385
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.