Gene: Rora (RAR-related orphan receptor A) Rattus norvegicus
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Symbol: Rora
Name: RAR-related orphan receptor A
Description: Predicted to have several functions, including RNA polymerase II proximal promoter sequence-specific DNA binding activity, beta-catenin binding activity, and transcription cofactor binding activity; involved in circadian rhythm; predicted to localize to the nucleus; orthologous to human RORA (RAR related orphan receptor A); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC300807; nuclear receptor ROR-alpha; RAR-related orphan receptor alpha
Orthologs:
Homo sapiens (human) : RORA (RAR related orphan receptor A)  HGNC  Alliance
Mus musculus (house mouse) : Rora (RAR-related orphan receptor alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rora (RAR related orphan receptor A)
Pan paniscus (bonobo/pygmy chimpanzee) : RORA (RAR related orphan receptor A)
Canis lupus familiaris (dog) : RORA (RAR related orphan receptor A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rora (RAR related orphan receptor A)
Sus scrofa (pig) : RORA (RAR related orphan receptor A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0875,515,886 - 75,616,477 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0879,195,918 - 79,934,499 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4873,052,282 - 73,817,764 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1873,744,425 - 73,837,420 (+)NCBI
Celera871,690,522 - 71,789,466 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rora
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308419
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.