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Gene: Usp5 (ubiquitin specific peptidase 5) Rattus norvegicus
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Symbol: Usp5
Name: ubiquitin specific peptidase 5
Description: Predicted to have cysteine-type endopeptidase activity; thiol-dependent ubiquitin-specific protease activity; and ubiquitin binding activity. Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and protein K48-linked deubiquitination. Orthologous to human USP5 (ubiquitin specific peptidase 5); INTERACTS WITH 2,4-dinitrotoluene; acrylamide; Brodifacoum.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC297593; ubiquitin carboxyl-terminal hydrolase 5; ubiquitin specific peptidase 5 (isopeptidase T); ubiquitin specific protease 5 (isopeptidase T)
Orthologs:
Homo sapiens (human) : USP5 (ubiquitin specific peptidase 5)  HGNC  Alliance
Mus musculus (house mouse) : Usp5 (ubiquitin specific peptidase 5 (isopeptidase T))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp5 (ubiquitin specific peptidase 5)
Pan paniscus (bonobo/pygmy chimpanzee) : USP5 (ubiquitin specific peptidase 5)
Canis lupus familiaris (dog) : USP5 (ubiquitin specific peptidase 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp5 (ubiquitin specific peptidase 5)
Sus scrofa (pig) : USP5 (ubiquitin specific peptidase 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04157,332,735 - 157,347,803 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04224,350,331 - 224,365,479 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44160,937,706 - 160,952,769 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4146,357,626 - 146,372,628 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Usp5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308438
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.