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Gene: Bdp1 (B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB) Rattus norvegicus
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Symbol: Bdp1
Name: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Description: Predicted to have TFIIIC-class transcription factor complex binding activity. Predicted to be involved in RNA polymerase III preinitiation complex assembly. Predicted to localize to nucleoplasm and transcription factor TFIIIB complex. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 112. Orthologous to human BDP1 (B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB); PARTICIPATES IN RNA polymerase III transcription pathway; INTERACTS WITH 2,4-dinitrotoluene; acetamide; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC294687; transcription factor TFIIIB component B'' homolog
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0230,248,458 - 30,340,211 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl230,250,633 - 30,340,208 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0249,486,780 - 49,499,375 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4231,035,334 - 31,127,835 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1230,958,250 - 31,048,519 (-)NCBI
Celera227,479,805 - 27,492,400 (-)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Bdp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308512
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.