Gene: Pglyrp4 (peptidoglycan recognition protein 4) Rattus norvegicus
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Symbol: Pglyrp4
Name: peptidoglycan recognition protein 4
Description: Predicted to have several functions, including N-acetylmuramoyl-L-alanine amidase activity, peptidoglycan binding activity, and peptidoglycan receptor activity; predicted to be involved in several processes, including antimicrobial humoral immune response mediated by antimicrobial peptide, growth of symbiont in host, and response to bacterium; predicted to localize to the extracellular space and protein-containing complex; orthologous to human PGLYRP4 (peptidoglycan recognition protein 4); INTERACTS WITH bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); cadmium dichloride (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC310611; similar to peptidoglycan recognition protein 4
Orthologs:
Homo sapiens (human) : PGLYRP4 (peptidoglycan recognition protein 4)  HGNC  Alliance
Mus musculus (house mouse) : Pglyrp4 (peptidoglycan recognition protein 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pglyrp4 (peptidoglycan recognition protein 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PGLYRP4 (peptidoglycan recognition protein 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02190,125,655 - 190,204,230 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02209,561,162 - 209,583,187 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42183,015,945 - 183,038,181 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12182,966,023 - 182,988,287 (+)NCBI
Celera2170,152,720 - 170,158,201 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pglyrp4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308520
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.