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Gene: Polr2d (RNA polymerase II subunit D) Rattus norvegicus
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Symbol: Polr2d
Name: RNA polymerase II subunit D
Description: Predicted to contribute to DNA-directed 5'-3' RNA polymerase activity; single-stranded DNA binding activity; and single-stranded RNA binding activity. Predicted to be involved in RNA metabolic process; mRNA export from nucleus in response to heat stress; and positive regulation of translational initiation. Predicted to localize to the cytoplasm and nucleoplasm. Orthologous to human POLR2D (RNA polymerase II subunit D); PARTICIPATES IN RNA polymerase II transcription pathway; Huntington's disease pathway; purine metabolic pathway; INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; gentamycin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-directed RNA polymerase II subunit RPB4; LOC364834; polymerase (RNA) II (DNA directed) polypeptide D; polymerase (RNA) II subunit D
Orthologs:
Homo sapiens (human) : POLR2D (RNA polymerase II subunit D)  HGNC  Alliance
Mus musculus (house mouse) : Polr2d (polymerase (RNA) II (DNA directed) polypeptide D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Polr2d (RNA polymerase II subunit D)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR2D (RNA polymerase II subunit D)
Canis lupus familiaris (dog) : POLR2D (RNA polymerase II subunit D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr2d (RNA polymerase II subunit D)
Sus scrofa (pig) : POLR2D (RNA polymerase II subunit D)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01824,570,762 - 24,577,894 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01824,287,960 - 24,295,092 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41824,205,326 - 24,212,458 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11824,232,026 - 24,239,027 (+)NCBI
Celera1823,170,705 - 23,177,837 (+)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Polr2d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308565
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.