Gene: Alkbh4 (alkB homolog 4, lysine demethylase) Rattus norvegicus
Analyze
Symbol: Alkbh4
Name: alkB homolog 4, lysine demethylase
Description: Predicted to have 2-oxoglutarate-dependent dioxygenase activity, actin binding activity, and demethylase activity; predicted to be involved in several processes, including actomyosin structure organization, cleavage furrow ingression, and oxidative demethylation; predicted to localize to the contractile ring and midbody; orthologous to human ALKBH4 (alkB homolog 4, lysine demethylase); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alkB homolog 4, lysine demthylase; alkB, alkylation repair homolog 4; alkB, alkylation repair homolog 4 (E. coli); alkylated DNA repair protein alkB homolog 4; alpha-ketoglutarate-dependent dioxygenase alkB homolog 4; LOC288587; RGD1308608; similar to hypothetical protein FLJ20013
Orthologs:
Homo sapiens (human) : ALKBH4 (alkB homolog 4, lysine demethylase)  HGNC  Alliance
Mus musculus (house mouse) : Alkbh4 (alkB homolog 4, lysine demethylase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Alkbh4 (alkB homolog 4, lysine demethylase)
Pan paniscus (bonobo/pygmy chimpanzee) : ALKBH4 (alkB homolog 4, lysine demethylase)
Canis lupus familiaris (dog) : ALKBH4 (alkB homolog 4, lysine demethylase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alkbh4 (alkB homolog 4, lysine demethylase)
Sus scrofa (pig) : ALKBH4 (alkB homolog 4, lysine demethylase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01223,568,204 - 23,574,133 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01225,568,554 - 25,574,483 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41221,639,400 - 21,645,317 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11221,630,562 - 21,635,583 (-)NCBI
Celera1222,292,412 - 22,298,329 (-)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Alkbh4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308608
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.