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Gene: Szt2 (SZT2 subunit of KICSTOR complex) Rattus norvegicus
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Symbol: Szt2
Name: SZT2 subunit of KICSTOR complex
Description: Predicted to be involved in several processes, including cellular response to starvation; corpus callosum morphogenesis; and negative regulation of TORC1 signaling. Predicted to colocalize with the GATOR1 complex and GATOR2 complex. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy 18. Orthologous to human SZT2 (SZT2 subunit of KICSTOR complex); INTERACTS WITH (RS)-amphetamine; bisphenol A; Monobutylphthalate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC362573; RGD1308616; seizure threshold 2; seizure threshold 2 homolog; seizure threshold 2 homolog (mouse); similar to KIAA0467 protein; SZT2, KICSTOR complex subunit
Orthologs:
Homo sapiens (human) : SZT2 (SZT2 subunit of KICSTOR complex)  HGNC  Alliance
Mus musculus (house mouse) : Szt2 (SZT2 subunit of KICSTOR complex)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Szt2 (SZT2 subunit KICSTOR complex)
Pan paniscus (bonobo/pygmy chimpanzee) : SZT2 (SZT2 subunit KICSTOR complex)
Canis lupus familiaris (dog) : SZT2 (SZT2 subunit of KICSTOR complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Szt2 (SZT2 subunit KICSTOR complex)
Sus scrofa (pig) : SZT2 (SZT2 subunit of KICSTOR complex)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05137,192,120 - 137,238,384 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05140,979,672 - 141,025,913 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.05142,699,676 - 142,711,040 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45138,843,690 - 138,890,241 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15138,849,231 - 138,871,344 (-)NCBI
Celera5130,442,737 - 130,489,407 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Szt2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308616
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.