Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Lingo1 (leucine rich repeat and Ig domain containing 1) Rattus norvegicus
Analyze
Symbol: Lingo1
Name: leucine rich repeat and Ig domain containing 1
Description: Predicted to have epidermal growth factor receptor binding activity. Predicted to be involved in generation of neurons and protein kinase B signaling. Predicted to localize to the extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in glaucoma. Orthologous to human LINGO1 (leucine rich repeat and Ig domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: leucine rich repeat neuronal 6A; leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1; LOC315691; Lrrn6a
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0861,272,125 - 61,455,480 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0859,842,273 - 60,025,178 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4860,335,369 - 60,351,617 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1860,353,788 - 60,376,585 (-)NCBI
Celera856,482,212 - 56,498,460 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Lingo1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308668
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.