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Gene: Pnldc1 (PARN like, ribonuclease domain containing 1) Rattus norvegicus
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Symbol: Pnldc1
Name: PARN like, ribonuclease domain containing 1
Description: Predicted to have RNA binding activity and poly(A)-specific ribonuclease activity. Predicted to be involved in blastocyst formation and nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to endoplasmic reticulum. Orthologous to human PNLDC1 (PARN like, ribonuclease domain containing 1); INTERACTS WITH acetamide; bisphenol A; trichloroethene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361478; MGC116282; poly(A)-specific ribonuclease (PARN)-like domain containing 1; poly(A)-specific ribonuclease PARN-like domain-containing protein 1
Orthologs:
Homo sapiens (human) : PNLDC1 (PARN like, ribonuclease domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Pnldc1 (poly(A)-specific ribonuclease (PARN)-like domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pnldc1 (PARN like, ribonuclease domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PNLDC1 (PARN like, ribonuclease domain containing 1)
Canis lupus familiaris (dog) : PNLDC1 (PARN like, ribonuclease domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pnldc1 (PARN like, ribonuclease domain containing 1)
Sus scrofa (pig) : PNLDC1 (PARN like, ribonuclease domain containing 1)
Chlorocebus sabaeus (African green monkey) : PNLDC1 (PARN like, ribonuclease domain containing 1)
Heterocephalus glaber (naked mole-rat) : Pnldc1 (PARN like, ribonuclease domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0148,038,830 - 48,058,400 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl148,039,909 - 48,058,400 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0151,693,998 - 51,713,576 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4142,117,702 - 42,136,153 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1142,120,646 - 42,139,098 (+)NCBI
Celera143,643,672 - 43,662,123 (+)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pnldc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308678
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.