Gene: Smarcb1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1) Rattus norvegicus
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Symbol: Smarcb1
Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Description: Predicted to have several functions, including RNA polymerase I CORE element sequence-specific DNA binding activity, Tat protein binding activity, and p53 binding activity; predicted to be involved in several processes, including chromatin organization, negative regulation of histone H3-K9 methylation, and positive regulation of cellular metabolic process; localizes to the nucleus; orthologous to human SMARCB1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC361825; MGC116367; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02013,679,955 - 13,702,821 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02015,836,242 - 15,858,384 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42013,140,331 - 13,162,437 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12013,140,557 - 13,162,664 (+)NCBI
Celera2014,232,795 - 14,254,901 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smarcb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1308761
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.